ChrX-STR.org 2.0
Database and information hub for forensic X-chromosomal markers



Marker GATA31E08

Create date: Jun 25, 2009 12:18:15 PM
Last update: Sep 27, 2010 1:56:09 PM
Cytogenetic localisation: q 27.10
Physical localisation NCBI 36: 140.062
Rutgers Map v.2: 160.54
Reference: Shin SH, Yu JS, Park SW, Min GS, Chung KW (2005) Genetic analysis of 18 X-linke...

Primer

PrimerF: 5' - AGGGGAGAAGGCTAGAATGA - 3'
PrimerR: 5' - CAGCTGACAGAGCACAGAGA - 3'

Typical structure

AllelebpsSequence composition
8--(AGAT)8-
9--(AGAT)9-
11--(AGAT)11-
12--(AGAT)12-
References: Shin SH, Yu JS, Park SW, Min GS, Chung KW (2005) Genetic analysis of 18 X-linke...

Cell line DNAAllele
9947A11, 11
K56211
References: Shin SH, Yu JS, Park SW, Min GS, Chung KW (2005) Genetic analysis of 18 X-linke...

Population data

The values of the evaluation parameters presented in the following table are calculated live utilizing the population data presented in the corresponding reference. For this reason it may happen that the numbers differ from the figures given in the reference. Click here to view the equations our calculations are based on.
IDPopulationReferencePICHETMEC KrügerMEC KishidaMEC DesmaraisMEC Desmarais duoPD femalePD male
1Belo Horizonte, BrazilGenetic...0.78800.81350.63200.78800.78800.66720.93970.8135
2Rio de Janeiro, BrazilGenetic...0.79670.82090.64400.79670.79670.67820.94370.8209
3São Paulo, BrazilGenetic...0.76800.79750.60230.76800.76800.64170.92950.7975
4Vitória, BrazilGenetic...0.78030.80730.62020.78010.78030.65730.93590.8073
ID Population Ethnic specification Reference n* 7 8 9 10 11 12 13 14 15
1 Belo Horizonte, Brazil admixed Genetic... 245 0.0115 0.0084 0.2010 0.0765 0.1162 0.2239 0.2633 0.0823 0.0169
2 Rio de Janeiro, Brazil admixed Genetic... 261 0.0073 0.0123 0.1626 0.0813 0.1453 0.2488 0.2291 0.1010 0.0123
3 São Paulo, Brazil admixed Genetic... 250 0.0024 0.0048 0.1353 0.0362 0.1715 0.2705 0.2633 0.1039 0.0121
4 Vitória, Brazil admixed Genetic... 245 0.0074 0.0049 0.1827 0.0543 0.1185 0.2765 0.2296 0.1136 0.0123
n* - If no information on the sex of the studied individuals is indicated, both sexes were examined.

References

No reference data.

Note

No data.

News

Based on the review of december 2018, it has been decided in cooperation with the X working group to remove the PI calculation from this website.